Okay I agree it's a stretch that Brainiac made him look like Jor-El. Unless it was a jab because Jor has always been considered the more astute and successful of the two. As far as the outfit that is the El family crest as well as the basic design and colors of the El family "graduation" outfit. This was explained way back in "Supergirl" and is why she was given her outfit before she left Krypton.
I was kinda curious as to where the super suit came from in the New52. Ever since I started reading comics WAY back in the early nineties, I dip my foot into Superman comics every two or three years. Since my last Superman comic was... issue 2 or 3 from the current run... I'm about to hit my window to check the titles out again.
Money permitting, of course. I've got a next gen video game system to buy.